Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter latericius |
| Strain | strain R-22-1 c-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407807 bp
Thymine Count
1414610 bp
Guanine Count
1408023 bp
Cytosine Count
1440738 bp
Genome Length
5672702 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EFB08_22705 | Not Available | Negative | 5536322 - 5536981 | 24057.2 |
| sugar kinase | EFB08_22710 | Not Available | Negative | 5536971 - 5537999 | 38022.4 |
| glucuronate isomerase | EFB08_22715 | Not Available | Negative | 5538003 - 5539400 | 53562.4 |
| tagaturonate reductase | EFB08_22720 | Not Available | Negative | 5539561 - 5540985 | 53451.5 |
| laci family transcriptional regulator | EFB08_22725 | Not Available | Negative | 5541186 - 5542229 | 38871.0 |
| gluconate 5-dehydrogenase | EFB08_22730 | Not Available | Negative | 5542291 - 5543079 | 28150.0 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | EFB08_22735 | Not Available | Negative | 5543086 - 5543928 | 31826.6 |
| tonb-dependent receptor | EFB08_22740 | Not Available | Positive | 5544236 - 5547499 | 120148.0 |
| ragb/susd family nutrient uptake outer membrane protein | EFB08_22745 | Not Available | Positive | 5547518 - 5549359 | 68467.6 |
| duf5123 domain-containing protein | EFB08_22750 | Not Available | Positive | 5549400 - 5551013 | 57418.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
