Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter latericius |
| Strain | strain R-22-1 c-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407807 bp
Thymine Count
1414610 bp
Guanine Count
1408023 bp
Cytosine Count
1440738 bp
Genome Length
5672702 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase domain-containing protein | EFB08_20330 | Not Available | Positive | 4970930 - 4972219 | 48695.5 |
| glycosyltransferase family 1 protein | EFB08_20335 | Not Available | Positive | 4972221 - 4973342 | 42031.3 |
| glycosyltransferase family 4 protein | EFB08_20340 | Not Available | Positive | 4973414 - 4974529 | 42638.2 |
| o-antigen ligase domain-containing protein | EFB08_20345 | Not Available | Positive | 4974507 - 4975769 | 48090.5 |
| histidine--trna ligase | EFB08_20350 | Not Available | Positive | 4976045 - 4977427 | 51370.0 |
| histidine ammonia-lyase | EFB08_20355 | Not Available | Positive | 4977427 - 4978932 | 54803.0 |
| gliding motility-associated c-terminal domain-containing protein | EFB08_20360 | Not Available | Positive | 4978941 - 4980572 | 59083.5 |
| ybab/ebfc family nucleoid-associated protein | EFB08_20365 | Not Available | Positive | 4980776 - 4981111 | 12219.9 |
| glycosyltransferase family 2 protein | EFB08_20370 | Not Available | Positive | 4981128 - 4982153 | 39272.6 |
| pspc domain-containing protein | EFB08_20375 | Not Available | Negative | 4982118 - 4982336 | 8463.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
