Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter latericius |
| Strain | strain R-22-1 c-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407807 bp
Thymine Count
1414610 bp
Guanine Count
1408023 bp
Cytosine Count
1440738 bp
Genome Length
5672702 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | EFB08_20180 | Not Available | Negative | 4934918 - 4935391 | 18454.3 |
| hypothetical protein | EFB08_20185 | Not Available | Negative | 4935392 - 4935787 | 14818.7 |
| hypothetical protein | EFB08_20190 | Not Available | Positive | 4935871 - 4937133 | 48576.1 |
| hypothetical protein | EFB08_20195 | Not Available | Negative | 4937197 - 4937433 | 8123.06 |
| zn-dependent hydrolase | EFB08_20200 | Not Available | Negative | 4937655 - 4938656 | 38158.1 |
| susc/raga family tonb-linked outer membrane protein | EFB08_20205 | Not Available | Positive | 4938863 - 4941988 | 113040.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EFB08_20210 | Not Available | Positive | 4942001 - 4943461 | 53067.0 |
| hypothetical protein | EFB08_20215 | Not Available | Positive | 4943482 - 4943961 | 17587.8 |
| hypothetical protein | EFB08_20220 | Not Available | Negative | 4944129 - 4945361 | 43981.1 |
| dipeptide epimerase | EFB08_20225 | Not Available | Negative | 4945680 - 4946747 | 38609.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
