Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter latericius |
| Strain | strain R-22-1 c-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407807 bp
Thymine Count
1414610 bp
Guanine Count
1408023 bp
Cytosine Count
1440738 bp
Genome Length
5672702 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase | EFB08_15930 | Not Available | Negative | 3953824 - 3954252 | 15958.3 |
| t9ss c-terminal target domain-containing protein | EFB08_15935 | Not Available | Negative | 3954406 - 3955875 | 55442.3 |
| ld-carboxypeptidase | EFB08_15940 | Not Available | Positive | 3956140 - 3957063 | 33568.6 |
| m28 family peptidase | EFB08_15945 | Not Available | Negative | 3957179 - 3958177 | 36261.6 |
| cysteine--trna ligase | EFB08_15950 | Not Available | Negative | 3958179 - 3959672 | 56395.1 |
| endonuclease/exonuclease/phosphatase | EFB08_15955 | Not Available | Negative | 3960318 - 3961571 | 47900.8 |
| twin-arginine translocase tata/tate family subunit | EFB08_15960 | Not Available | Positive | 3961662 - 3962048 | 13883.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | EFB08_15965 | Not Available | Positive | 3962052 - 3963488 | 51957.8 |
| lysm peptidoglycan-binding domain-containing protein | EFB08_15970 | Not Available | Positive | 3963488 - 3965068 | 59035.7 |
| nadp-dependent malic enzyme | EFB08_15975 | Not Available | Positive | 3965295 - 3967562 | 82734.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
