Rufibacter latericius strain R-22-1 c-1

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Rufibacter

Description

Rufibacter latericius strain R-22-1 c-1 is characterized by having a single replicon, which is a noteworthy trait as it can influence the strain's stability and replication efficiency. The genome of this strain is cataloged under the accession number RJJD00000000.1, providing a reference point for further genomic studies and comparisons within the species. The single replicon suggests that Rufibacter latericius R-22-1 c-1 may exhibit streamlined genetic regulation, which can be advantageous in specific environmental conditions. This trait can reflect the strain's adaptation to its ecological niche, potentially allowing it to optimize its metabolic processes and resource utilization. Understanding the genomic characteristics of Rufibacter latericius R-22-1 c-1 can provide insights into its ecological role and interactions within microbial communities. The simplicity of having one replicon may also facilitate studies on gene expression and functional analyses, contributing to our comprehension of the strain's capabilities in various environments. Overall, the genomic framework indicated by the accession RJJD00000000.1 lays the groundwork for future research, which may enhance our knowledge of microbial diversity and its implications for ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusRufibacter
SpeciesRufibacter latericius
Strainstrain R-22-1 c-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rufibacter latericius strain R-22-1 c-1

Gene Summary

Adenine Count

1407807 bp

Thymine Count

1414610 bp

Guanine Count

1408023 bp

Cytosine Count

1440738 bp

Genome Length

5672702 bp

Protein-coding Genes

4570 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
preprotein translocase subunit secyEFB08_14820Not AvailableNegative3690551 - 369187647708.7
50s ribosomal protein l15EFB08_14825Not AvailableNegative3691881 - 369232715687.8
50s ribosomal protein l30EFB08_14830Not AvailableNegative3692329 - 36925086600.3
30s ribosomal protein s5EFB08_14835Not AvailableNegative3692511 - 369302918108.2
50s ribosomal protein l18EFB08_14840Not AvailableNegative3693034 - 369338712577.0
50s ribosomal protein l6EFB08_14845Not AvailableNegative3693396 - 369395019725.3
30s ribosomal protein s8EFB08_14850Not AvailableNegative3693961 - 369435914743.0
30s ribosomal protein s14EFB08_14855Not AvailableNegative3694446 - 36947159962.3
50s ribosomal protein l5EFB08_14860Not AvailableNegative3694720 - 369527120327.1
50s ribosomal protein l24EFB08_14865Not AvailableNegative3695273 - 369559611450.0

Displaying genes 2951 – 2960 of 4627 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.