Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter latericius |
| Strain | strain R-22-1 c-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407807 bp
Thymine Count
1414610 bp
Guanine Count
1408023 bp
Cytosine Count
1440738 bp
Genome Length
5672702 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | EFB08_06675 | Not Available | Negative | 1679861 - 1680700 | 30903.6 |
| sigma-70 family rna polymerase sigma factor | EFB08_06680 | Not Available | Negative | 1680703 - 1681209 | 19388.5 |
| nad-dependent succinate-semialdehyde dehydrogenase | EFB08_06685 | Not Available | Positive | 1681466 - 1682839 | 49860.4 |
| ydcf family protein | EFB08_06690 | Not Available | Negative | 1682830 - 1683258 | 16045.2 |
| hypothetical protein | EFB08_06695 | Not Available | Negative | 1683246 - 1683593 | 13239.6 |
| duf2905 domain-containing protein | EFB08_06700 | Not Available | Negative | 1683687 - 1683911 | 8293.82 |
| t9ss c-terminal target domain-containing protein | EFB08_06705 | Not Available | Positive | 1684103 - 1685884 | 64019.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | EFB08_06710 | Not Available | Positive | 1686117 - 1686860 | 27997.4 |
| translation initiation factor | EFB08_06715 | Not Available | Negative | 1686925 - 1687269 | 12565.9 |
| yegs/rv2252/bmru family lipid kinase | EFB08_06720 | Not Available | Negative | 1687273 - 1688178 | 32148.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
