Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter latericius |
| Strain | strain R-22-1 c-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407807 bp
Thymine Count
1414610 bp
Guanine Count
1408023 bp
Cytosine Count
1440738 bp
Genome Length
5672702 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | EFB08_06025 | Not Available | Negative | 1530982 - 1532778 | 69433.7 |
| thioesterase | EFB08_06030 | Not Available | Positive | 1533214 - 1533645 | 16297.7 |
| m20/m25/m40 family metallo-hydrolase | EFB08_06035 | Not Available | Positive | 1533754 - 1535346 | 58304.3 |
| m1 family peptidase | EFB08_06040 | Not Available | Negative | 1535445 - 1537100 | 63151.9 |
| membrane or secreted protein | EFB08_06045 | Not Available | Negative | 1537236 - 1539827 | 96831.4 |
| glycoside hydrolase family 32 protein | EFB08_06050 | Not Available | Negative | 1540069 - 1541580 | 56561.9 |
| duf4975 domain-containing protein | EFB08_06055 | Not Available | Negative | 1541777 - 1543333 | 56831.4 |
| duf4960 domain-containing protein | EFB08_06060 | Not Available | Negative | 1543616 - 1545028 | 50527.3 |
| hypothetical protein | EFB08_06065 | Not Available | Negative | 1545057 - 1547024 | 74101.9 |
| ragb/susd family nutrient uptake outer membrane protein | EFB08_06070 | Not Available | Negative | 1547158 - 1548855 | 64699.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
