Helicobacter pylori strain ZH108 42

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH108 42 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. This strain is primarily found in association with hosts, including humans (Homo sapiens) and various animals such as Gallus gallus, Aves, Primates, Mammalia, Amoeba, Rodentia, and Cricetinae. It has a single replicon and two membranes, typical of its genus. The optimal growth temperature for H. pylori ZH108 42 is 37°C, placing it within the mesophilic temperature range. Its mobility is limited, and it exists as single cells rather than in clusters. In terms of its biotic relationships, it is classified as free-living, indicating its ability to survive outside of a host. H. pylori strain ZH108 42 is notably pathogenic in humans, associated with a wide range of gastrointestinal diseases. These include chronic gastric inflammation, gastric ulcers, and various forms of gastric cancer, such as adenocarcinoma and MALT lymphoma. Furthermore, it can cause functional dyspepsia and has been implicated in conditions like GERD and atrophic gastritis. The ecological impact of H. pylori is significant, as it can induce asymptomatic mucosal inflammatory responses and lead to serious health conditions. The bacterium's relationship with its host suggests a complex interplay where it can persist in the gastric environment, potentially leading to chronic health issues over time. Understanding the pathogenic mechanisms of H. pylori ZH108 42 is crucial for addressing its role in gastrointestinal diseases and developing effective treatment strategies.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain ZH108 42

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain ZH108 42
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH108 42, whole genome shotgun

Gene Summary

Adenine Count

500602 bp

Thymine Count

492424 bp

Guanine Count

314766 bp

Cytosine Count

315727 bp

Genome Length

1626445 bp

Protein-coding Genes

1481 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseEC558_06625Not AvailablePositive1341364 - 134221231303.0
iron chelating abc transporter permeaseEC558_06630Not AvailablePositive1342205 - 134318534626.0
iron chelating transport atp-binding proteinEC558_06635Not AvailablePositive1343185 - 134395228683.5
autotransporter vacuolating cytotoxin vacaEC558_06640Not AvailableNegative1344012 - 1347902140008.0
cysteine--trna ligaseEC558_06645Not AvailableNegative1348124 - 134952153197.8
murein biosynthesis integral membrane protein murjEC558_06650Not AvailableNegative1349522 - 135098254419.7
duf342 domain-containing proteinEC558_06655Not AvailablePositive1351075 - 135291970776.9
holliday junction branch migration protein ruvaEC558_06660Not AvailablePositive1352945 - 135349620089.9
duf3519 domain-containing proteinEC558_06665Not AvailablePositive1353586 - 135497152271.4
hypothetical proteinEC558_06670Not AvailablePositive1355348 - 135562310218.5

Displaying genes 1261 – 1270 of 1523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total