Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit alpha | D9K54_03845 | Not Available | Positive | 796496 - 798028 | 55194.0 |
| citrate lyase holo-[acyl-carrier protein] synthase | D9K54_03850 | Not Available | Positive | 798032 - 798583 | 20190.4 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | D9K54_03855 | Not Available | Positive | 798558 - 799436 | 31646.4 |
| anion permease | D9K54_03860 | Not Available | Positive | 799487 - 800950 | 53095.7 |
| ribonuclease i | D9K54_03865 | Not Available | Positive | 801064 - 801870 | 29605.1 |
| nucleoside diphosphate kinase regulator | D9K54_03870 | Not Available | Positive | 802099 - 802509 | 14928.0 |
| glutathione-dependent formaldehyde dehydrogenase | D9K54_03875 | Not Available | Negative | 802740 - 803978 | 44225.2 |
| universal stress protein uspg | D9K54_03880 | Not Available | Positive | 804199 - 804627 | 15865.1 |
| alkyl hydroperoxide reductase subunit f | D9K54_03885 | Not Available | Negative | 804748 - 806313 | 56180.4 |
| alkyl hydroperoxide reductase subunit c | D9K54_03890 | Not Available | Negative | 806484 - 807047 | 20762.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





