Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | D9K54_03745 | Not Available | Positive | 777348 - 777815 | 17342.1 |
| penicillin-binding protein 2 | D9K54_03750 | Not Available | Positive | 777846 - 779747 | 70860.6 |
| rod shape-determining protein roda | D9K54_03755 | Not Available | Positive | 779750 - 780862 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | D9K54_03760 | Not Available | Positive | 780873 - 781961 | 37475.0 |
| d-alanyl-d-alanine carboxypeptidase | D9K54_03765 | Not Available | Positive | 782101 - 783312 | 44446.5 |
| duf493 family protein | D9K54_03770 | Not Available | Positive | 783422 - 783685 | 9827.92 |
| octanoyltransferase | D9K54_03775 | Not Available | Positive | 783786 - 784427 | 23870.0 |
| dna-binding transcriptional regulator | D9K54_03780 | Not Available | Positive | 784687 - 785640 | 35890.4 |
| lipoyl synthase | D9K54_03785 | Not Available | Positive | 785849 - 786814 | 36073.8 |
| twin-arginine translocase subunit tate | D9K54_03790 | Not Available | Negative | 786915 - 787118 | 7024.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





