Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lydc | D9K54_10045 | Not Available | Positive | 2062780 - 2063061 | 10507.9 |
| Lysis determining protein lyda | D9K54_10050 | Not Available | Positive | 2063129 - 2063458 | 11467.2 |
| Lysis determining protein lydb | D9K54_10055 | Not Available | Positive | 2063455 - 2063898 | 17197.8 |
| Conserved protein of unknown function hdf | D9K54_10060 | Not Available | Positive | 2063885 - 2064487 | 21771.2 |
| Dara | D9K54_10065 | Not Available | Positive | 2064489 - 2066408 | 69599.1 |
| Conserved protein of unknown function ddra | D9K54_10070 | Not Available | Positive | 2066405 - 2066770 | 12958.2 |
| Hypothetical protein | D9K54_10075 | Not Available | Positive | 2066783 - 2069770 | 108728.0 |
| Putative repressor protein hxr | D9K54_10080 | Not Available | Positive | 2069760 - 2070065 | 10904.5 |
| porin | D9K54_10085 | Not Available | Positive | 2070805 - 2071920 | 40896.0 |
| Single-stranded dna-binding protein | D9K54_10090 | Not Available | Negative | 2072154 - 2072642 | 18192.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





