Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | D9K54_03390 | Not Available | Positive | 709871 - 710143 | 10469.6 |
| endoribonuclease ghos | D9K54_03395 | Not Available | Positive | 710370 - 710666 | 11468.6 |
| duf2566 domain-containing protein | D9K54_03400 | Not Available | Positive | 710694 - 710867 | 6569.47 |
| lysine--trna ligase heat inducible | D9K54_03405 | Not Available | Negative | 710986 - 712503 | 57829.9 |
| dipeptide and tripeptide permease c | D9K54_03410 | Not Available | Negative | 712740 - 714197 | 53043.7 |
| lysine decarboxylase cada | D9K54_03415 | Not Available | Negative | 714256 - 716403 | 81264.7 |
| cadaverine/lysine antiporter | D9K54_03420 | Not Available | Negative | 716483 - 717817 | 46667.8 |
| hypothetical protein | D9K54_03425 | Not Available | Positive | 718047 - 718292 | 9324.27 |
| transcriptional regulator cadc | D9K54_03430 | Not Available | Negative | 718183 - 719721 | 57832.1 |
| type ii toxin-antitoxin system rele/pare family toxin | D9K54_03435 | Not Available | Negative | 720604 - 720930 | 12420.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





