Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose import atp-binding protein rbsa 2 | D9K54_03190 | Not Available | Negative | 667796 - 669316 | 55221.5 |
| histidine kinase | D9K54_03195 | Not Available | Positive | 669315 - 669428 | 4016.86 |
| hybrid sensor histidine kinase/response regulator | D9K54_03200 | Not Available | Positive | 669430 - 671691 | 82231.5 |
| hypothetical protein | D9K54_03205 | Not Available | Positive | 671760 - 672089 | 13485.3 |
| phosphonate metabolism protein phnp | D9K54_03210 | Not Available | Negative | 672233 - 672991 | 27878.3 |
| protein phno | D9K54_03215 | Not Available | Negative | 672993 - 673427 | 16570.8 |
| ribose 1,5-bisphosphokinase | D9K54_03220 | Not Available | Negative | 673414 - 673971 | 20657.7 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | D9K54_03225 | Not Available | Negative | 673971 - 675107 | 42042.9 |
| phosphonate c-p lyase system protein phnl | D9K54_03230 | Not Available | Negative | 675104 - 675784 | 24673.0 |
| phosphonate c-p lyase system protein phnk | D9K54_03235 | Not Available | Negative | 675895 - 676653 | 27803.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





