Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tape measure protein | D9K54_09995 | Not Available | Positive | 2052531 - 2055953 | 120700.0 |
| Pmga | D9K54_10000 | Not Available | Positive | 2055953 - 2056309 | 13240.7 |
| Putative baseplate structural protein | D9K54_10005 | Not Available | Positive | 2056306 - 2057739 | 53608.4 |
| Putative tail tube structural protein gp16 | D9K54_10010 | Not Available | Positive | 2057739 - 2058575 | 31343.5 |
| Tail fiber protein r | D9K54_10015 | Not Available | Positive | 2058654 - 2059088 | 15961.0 |
| Tail fibrer protein gps | D9K54_10020 | Not Available | Positive | 2059100 - 2060467 | 47136.6 |
| Tail fiber assembly protein | D9K54_10025 | Not Available | Positive | 2061133 - 2061315 | 6549.45 |
| Tail fiber assembly protein | D9K54_10030 | Not Available | Negative | 2061296 - 2061727 | 16151.9 |
| Tail protein | D9K54_10035 | Not Available | Negative | 2061730 - 2062107 | 13456.9 |
| Cin | D9K54_10040 | Not Available | Negative | 2062092 - 2062652 | 21231.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





