Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_03035 | Not Available | Negative | 630762 - 631043 | 10304.0 |
| eal domain-containing protein | D9K54_03040 | Not Available | Positive | 631473 - 633059 | 60834.8 |
| regulatory protein soxs | D9K54_03045 | Not Available | Negative | 633062 - 633385 | 12911.6 |
| redox-sensitive transcriptional activator soxr | D9K54_03050 | Not Available | Positive | 633471 - 633935 | 17150.7 |
| guanine/hypoxanthine permease ghxp | D9K54_03055 | Not Available | Positive | 634481 - 635830 | 45714.4 |
| na+/h+ antiporter | D9K54_03060 | Not Available | Positive | 635981 - 637630 | 60527.5 |
| pentapeptide repeat-containing protein | D9K54_03065 | Not Available | Negative | 637784 - 639076 | 49439.1 |
| cation acetate symporter | D9K54_03070 | Not Available | Negative | 639254 - 640903 | 59200.7 |
| duf485 domain-containing protein | D9K54_03075 | Not Available | Negative | 640900 - 641214 | 11672.3 |
| acetate--coa ligase | D9K54_03080 | Not Available | Negative | 641415 - 643373 | 72069.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





