Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase dnab | D9K54_02980 | Not Available | Positive | 620278 - 621693 | 52393.1 |
| alanine racemase | D9K54_02985 | Not Available | Positive | 621746 - 622825 | 39197.3 |
| aromatic amino acid transaminase | D9K54_02990 | Not Available | Positive | 623078 - 624271 | 43493.2 |
| hypothetical protein | D9K54_02995 | Not Available | Negative | 624495 - 624746 | 9793.67 |
| class b acid phosphatase | D9K54_03005 | Not Available | Positive | 625416 - 626129 | 26104.9 |
| thiamine phosphate synthase | D9K54_03010 | Not Available | Positive | 626240 - 626656 | 15670.8 |
| mmcq/yjbr family dna-binding protein | D9K54_03015 | Not Available | Positive | 626660 - 627016 | 13520.2 |
| excinuclease abc subunit uvra | D9K54_03020 | Not Available | Negative | 627051 - 629873 | 103874.0 |
| hypothetical protein | D9K54_03025 | Not Available | Positive | 629824 - 630006 | 7154.91 |
| ssdna-binding protein | D9K54_03030 | Not Available | Positive | 630127 - 630663 | 18976.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





