Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | D9K54_02615 | Not Available | Negative | 541806 - 542528 | 27225.7 |
| hydroxyacylglutathione hydrolase | D9K54_02620 | Not Available | Positive | 542562 - 543317 | 28435.9 |
| murein transglycosylase d | D9K54_02625 | Not Available | Positive | 543389 - 544747 | 49420.3 |
| class i sam-dependent methyltransferase | D9K54_02630 | Not Available | Negative | 544795 - 545565 | 28381.5 |
| endonuclease/exonuclease/phosphatase family protein | D9K54_02635 | Not Available | Negative | 545643 - 546443 | 29993.4 |
| lysr family transcriptional regulator | D9K54_02640 | Not Available | Positive | 546684 - 547598 | 33738.7 |
| 2,5-didehydrogluconate reductase dkgb | D9K54_02645 | Not Available | Negative | 547595 - 548398 | 29453.4 |
| Trna-asp | Not Available | Not Available | Positive | 548561 - 548637 | Not Available |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | D9K54_02660 | Not Available | Negative | 549171 - 551000 | 66879.3 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | D9K54_02665 | Not Available | Negative | 551162 - 552532 | 49208.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





