Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | D9K54_02505 | Not Available | Positive | 518327 - 519802 | 55705.0 |
| type vi secretion system baseplate subunit tsse | D9K54_02510 | Not Available | Positive | 519809 - 520222 | 15493.0 |
| type vi secretion system baseplate subunit tssf | D9K54_02515 | Not Available | Positive | 520226 - 522076 | 71222.1 |
| type vi secretion system baseplate subunit tssg | D9K54_02520 | Not Available | Positive | 522040 - 523122 | 40262.1 |
| type vi secretion system-associated fha domain protein tagh | D9K54_02525 | Not Available | Positive | 523147 - 524427 | 47349.7 |
| type vi secretion system lipoprotein tssj | D9K54_02530 | Not Available | Positive | 524424 - 524948 | 19424.0 |
| type vi secretion system baseplate subunit tssk | D9K54_02535 | Not Available | Positive | 524951 - 526282 | 49914.7 |
| dotu family type iv/vi secretion system protein | D9K54_02540 | Not Available | Positive | 526287 - 527048 | 29390.8 |
| type vi secretion system-associated protein tago | D9K54_02550 | Not Available | Positive | 529792 - 530535 | 26417.7 |
| type vi secretion system protein tssa | D9K54_02555 | Not Available | Positive | 530540 - 531952 | 52237.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





