Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoheptose isomerase | D9K54_02445 | Not Available | Negative | 503069 - 503647 | 20816.0 |
| acyl-coa dehydrogenase | D9K54_02450 | Not Available | Positive | 503887 - 506331 | 89201.6 |
| inhibitor of vertebrate lysozyme | D9K54_02455 | Not Available | Negative | 506374 - 506847 | 16873.2 |
| amidohydrolase | D9K54_02460 | Not Available | Positive | 507001 - 507771 | 28938.5 |
| sel1 repeat family protein | D9K54_02470 | Not Available | Negative | 508501 - 509523 | 38292.9 |
| type vi secretion system tip protein vgrg | D9K54_02480 | Not Available | Negative | 513983 - 515005 | 36838.6 |
| type vi secretion system tip protein vgrg | D9K54_02485 | Not Available | Negative | 515006 - 516092 | 41857.1 |
| hcp family type vi secretion system effector | D9K54_02490 | Not Available | Negative | 516302 - 516820 | 19256.8 |
| type vi secretion system contractile sheath small subunit | D9K54_02495 | Not Available | Positive | 517517 - 518017 | 18052.4 |
| hypothetical protein | D9K54_02500 | Not Available | Positive | 518052 - 518276 | 8411.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





