Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar type iii secretion system protein fliq | D9K54_02395 | Not Available | Positive | 494601 - 494873 | 9684.52 |
| flagellar biosynthetic protein flir | D9K54_02400 | Not Available | Positive | 494875 - 495657 | 28677.3 |
| flagellar type iii secretion system protein flhb | D9K54_02405 | Not Available | Positive | 495647 - 496786 | 42765.7 |
| flagellar biosynthesis protein flha | D9K54_02410 | Not Available | Positive | 496770 - 498863 | 75694.6 |
| transposase | D9K54_02415 | Not Available | Negative | 499056 - 499553 | 19997.8 |
| peptidoglycan endopeptidase | D9K54_02420 | Not Available | Negative | 499729 - 500478 | 28781.3 |
| type ii toxin-antitoxin system antitoxin dinj | D9K54_02425 | Not Available | Positive | 500688 - 500948 | 9334.27 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | D9K54_02430 | Not Available | Positive | 500951 - 501229 | 10831.2 |
| transpeptidase | D9K54_02435 | Not Available | Positive | 501385 - 502125 | 28022.8 |
| class ii glutamine amidotransferase | D9K54_02440 | Not Available | Negative | 502096 - 502863 | 28580.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





