Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar export protein flij | D9K54_02345 | Not Available | Negative | 485791 - 486225 | 16016.3 |
| flagellar protein export atpase flii | D9K54_02350 | Not Available | Negative | 486228 - 487568 | 47920.4 |
| flagellar assembly protein h | D9K54_02355 | Not Available | Negative | 487561 - 488271 | 26425.3 |
| flagellar motor switch protein flig | D9K54_02360 | Not Available | Negative | 488275 - 489285 | 38219.2 |
| flagellar m-ring protein flif | D9K54_02365 | Not Available | Negative | 489263 - 490909 | 59771.4 |
| flagellar hook-basal body protein flie | D9K54_02370 | Not Available | Negative | 490914 - 491255 | 12183.6 |
| sigma-54-dependent fis family transcriptional regulator | D9K54_02375 | Not Available | Negative | 491270 - 492247 | 36072.7 |
| flim/flin family flagellar motor switch protein | D9K54_02380 | Not Available | Positive | 492634 - 493485 | 31582.4 |
| hypothetical protein | D9K54_02385 | Not Available | Positive | 493478 - 493849 | 13673.5 |
| flagellar biosynthetic protein flip | D9K54_02390 | Not Available | Positive | 493846 - 494598 | 27172.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





