Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoporin phoe | D9K54_02140 | Not Available | Positive | 449848 - 450903 | 38968.1 |
| sigma factor-binding protein crl | D9K54_02145 | Not Available | Negative | 450942 - 451343 | 15656.7 |
| esterase | D9K54_02150 | Not Available | Negative | 451401 - 452645 | 47039.4 |
| xanthine phosphoribosyltransferase | D9K54_02155 | Not Available | Negative | 452737 - 453195 | 16971.6 |
| cytosol nonspecific dipeptidase | D9K54_02160 | Not Available | Positive | 453456 - 454913 | 52920.4 |
| peptide chain release factor h | D9K54_02165 | Not Available | Negative | 454970 - 455506 | 20426.1 |
| hypothetical protein | D9K54_02170 | Not Available | Negative | 455439 - 455705 | 9970.01 |
| gnat family n-acetyltransferase | D9K54_02175 | Not Available | Negative | 456012 - 456464 | 17450.0 |
| dna polymerase iv | D9K54_02180 | Not Available | Negative | 456461 - 457516 | 39490.2 |
| putative lateral flagellar export/assembly protein lafu | D9K54_02185 | Not Available | Negative | 457587 - 458510 | 34233.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





