Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | D9K54_09895 | Not Available | Positive | 2036023 - 2036832 | 30630.7 |
| Partition protein para | D9K54_09900 | Not Available | Positive | 2037001 - 2038197 | 44224.0 |
| Partition protein parb | D9K54_09905 | Not Available | Positive | 2038214 - 2039215 | 37442.8 |
| Major head protein gp23 | D9K54_09910 | Not Available | Positive | 2039441 - 2041147 | 62269.1 |
| Tail sheath protein gp22 | D9K54_09915 | Not Available | Positive | 2041208 - 2042797 | 57034.6 |
| Tail tube protein | D9K54_09920 | Not Available | Positive | 2042807 - 2043619 | 29105.7 |
| Putative morphogenetic protein pmgg | D9K54_09925 | Not Available | Positive | 2043655 - 2044236 | 20653.6 |
| Putative baseplate structural protein | D9K54_09930 | Not Available | Positive | 2044248 - 2044757 | 18821.1 |
| Host killer protein | D9K54_09935 | Not Available | Negative | 2044874 - 2045029 | 5784.31 |
| Hypothetical protein | D9K54_09940 | Not Available | Negative | 2045211 - 2045456 | 9518.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





