Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D9K54_01980 | Not Available | Negative | 420978 - 421871 | 33280.2 |
| lysr family transcriptional regulator | D9K54_01985 | Not Available | Negative | 422072 - 422998 | 34392.6 |
| alpha/beta hydrolase | D9K54_01990 | Not Available | Positive | 423155 - 424075 | 33267.6 |
| nadh-dependent flavin oxidoreductase | D9K54_01995 | Not Available | Positive | 424310 - 425452 | 41854.1 |
| hypothetical protein | D9K54_02000 | Not Available | Positive | 425926 - 426027 | 3972.92 |
| 50s ribosomal protein l31 type b | D9K54_02005 | Not Available | Positive | 426391 - 426654 | 9920.71 |
| 50s ribosomal protein l36 | D9K54_02010 | Not Available | Positive | 426654 - 426794 | 5466.94 |
| hypothetical protein | D9K54_02015 | Not Available | Negative | 426864 - 427055 | 7297.65 |
| hypothetical protein | D9K54_02020 | Not Available | Negative | 427204 - 427407 | 7696.7 |
| luxr family transcriptional regulator | D9K54_02025 | Not Available | Positive | 427879 - 428421 | 21231.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





