Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | D9K54_28560 | Not Available | Positive | 5578897 - 5579562 | 25244.2 |
| tonb-dependent receptor | D9K54_28565 | Not Available | Negative | 5579598 - 5581700 | 77191.9 |
| ynce family protein | D9K54_28570 | Not Available | Positive | 5581942 - 5583003 | 38674.2 |
| l-asparagine permease | D9K54_28575 | Not Available | Negative | 5583116 - 5584615 | 54236.3 |
| glutathione s-transferase family protein | D9K54_28580 | Not Available | Positive | 5584882 - 5585499 | 23324.0 |
| hypothetical protein | D9K54_28585 | Not Available | Positive | 5585566 - 5585787 | 8664.08 |
| type vi secretion system tip protein vgrg | D9K54_28590 | Not Available | Positive | 5586608 - 5587828 | 46775.8 |
| type vi secretion system tip protein vgrg | D9K54_28595 | Not Available | Positive | 5587829 - 5588684 | 30754.7 |
| hypothetical protein | D9K54_28600 | Not Available | Positive | 5588752 - 5589201 | 15598.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





