Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase family protein | D9K54_28345 | Not Available | Positive | 5536275 - 5536880 | 22609.6 |
| hypothetical protein | D9K54_28350 | Not Available | Positive | 5536880 - 5537776 | 33392.0 |
| alpha/beta fold hydrolase | D9K54_28355 | Not Available | Positive | 5537792 - 5539549 | 65425.3 |
| hypothetical protein | D9K54_28360 | Not Available | Positive | 5539539 - 5540855 | 50781.9 |
| fmn-dependent nadh-azoreductase | D9K54_28365 | Not Available | Negative | 5540909 - 5541514 | 21642.9 |
| atp-dependent rna helicase hrpa | D9K54_28370 | Not Available | Positive | 5541715 - 5545617 | 148955.0 |
| ydcf family protein | D9K54_28375 | Not Available | Positive | 5545889 - 5546689 | 29711.4 |
| aldehyde dehydrogenase | D9K54_28380 | Not Available | Positive | 5546886 - 5548325 | 52241.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | D9K54_28385 | Not Available | Negative | 5548367 - 5549368 | 35733.6 |
| cytochrome b561 | D9K54_28390 | Not Available | Positive | 5549557 - 5550087 | 20329.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





