Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | D9K54_28235 | Not Available | Negative | 5505022 - 5506467 | 52226.4 |
| amidohydrolase | D9K54_28240 | Not Available | Negative | 5506467 - 5507777 | 46809.3 |
| lysr family transcriptional regulator | D9K54_28245 | Not Available | Positive | 5507953 - 5508861 | 34045.1 |
| dna endonuclease smra | D9K54_28250 | Not Available | Positive | 5509191 - 5509754 | 21513.7 |
| sensor domain-containing diguanylate cyclase | D9K54_28255 | Not Available | Negative | 5509775 - 5511007 | 46483.9 |
| zinc transporter zntb | D9K54_28260 | Not Available | Positive | 5511262 - 5512245 | 36614.3 |
| atp-dependent rna helicase dbpa | D9K54_28265 | Not Available | Positive | 5512723 - 5514096 | 49218.7 |
| trna 2-thiocytidine(32) synthetase ttca | D9K54_28270 | Not Available | Negative | 5514225 - 5515160 | 35461.8 |
| universal stress protein uspf | D9K54_28275 | Not Available | Negative | 5515336 - 5515770 | 15959.4 |
| porin ompn | D9K54_28280 | Not Available | Negative | 5515911 - 5517044 | 41207.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





