Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) kinase | D9K54_01780 | Not Available | Negative | 379543 - 380421 | 32580.3 |
| molecular chaperone grpe | D9K54_01785 | Not Available | Positive | 380353 - 380547 | 7202.78 |
| nucleotide exchange factor grpe | D9K54_01790 | Not Available | Positive | 380544 - 381137 | 21813.1 |
| duf21 domain-containing protein | D9K54_01795 | Not Available | Negative | 381192 - 382433 | 46301.9 |
| inner membrane protein ypjd | D9K54_01800 | Not Available | Negative | 382499 - 383290 | 29263.9 |
| signal recognition particle protein | D9K54_01805 | Not Available | Positive | 383457 - 384818 | 49790.5 |
| 30s ribosomal protein s16 | D9K54_01810 | Not Available | Positive | 384955 - 385203 | 9191.08 |
| ribosome maturation factor rimm | D9K54_01815 | Not Available | Positive | 385222 - 385770 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D9K54_01820 | Not Available | Positive | 385801 - 386568 | 28424.0 |
| 50s ribosomal protein l19 | D9K54_01825 | Not Available | Positive | 386610 - 386957 | 13134.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





