Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein d | D9K54_28080 | Not Available | Positive | 5472247 - 5472468 | 8042.22 |
| thiosulfate sulfurtransferase pspe | D9K54_28085 | Not Available | Positive | 5472543 - 5472857 | 11476.0 |
| sugar phosphorylase | D9K54_28090 | Not Available | Positive | 5473069 - 5474748 | 64220.3 |
| carbohydrate abc transporter substrate-binding protein | D9K54_28095 | Not Available | Positive | 5474762 - 5476054 | 46747.0 |
| abc transporter permease | D9K54_28100 | Not Available | Positive | 5476075 - 5476956 | 33227.3 |
| alcohol dehydrogenase | D9K54_28110 | Not Available | Positive | 5477816 - 5478868 | 38311.6 |
| sugar phosphate isomerase/epimerase | D9K54_28115 | Not Available | Positive | 5478886 - 5479674 | 29832.6 |
| gfo/idh/moca family oxidoreductase | D9K54_28120 | Not Available | Positive | 5479684 - 5480739 | 38672.4 |
| glycoside hydrolase family 65 protein | D9K54_28125 | Not Available | Positive | 5480736 - 5483003 | 84741.1 |
| beta-phosphoglucomutase | D9K54_28130 | Not Available | Positive | 5483000 - 5483659 | 23612.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





