Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | D9K54_27980 | Not Available | Positive | 5452088 - 5453461 | 49267.2 |
| bcr/cfla family efflux mfs transporter | D9K54_27985 | Not Available | Positive | 5453470 - 5454633 | 41422.1 |
| peptide abc transporter atp-binding protein sapf | D9K54_27990 | Not Available | Negative | 5454683 - 5455489 | 30572.5 |
| peptide abc transporter atp-binding protein sapd | D9K54_27995 | Not Available | Negative | 5455491 - 5456483 | 37662.9 |
| peptide abc transporter permease sapc | D9K54_28000 | Not Available | Negative | 5456483 - 5457373 | 31550.0 |
| peptide abc transporter permease | D9K54_28005 | Not Available | Negative | 5457360 - 5458325 | 36040.2 |
| abc transporter substrate-binding protein | D9K54_28010 | Not Available | Negative | 5458322 - 5459965 | 61552.2 |
| duf2543 family protein | D9K54_28015 | Not Available | Negative | 5460277 - 5460522 | 9307.77 |
| putrescine importer puup | D9K54_28020 | Not Available | Negative | 5460656 - 5462041 | 50900.0 |
| hypothetical protein | D9K54_28025 | Not Available | Negative | 5462031 - 5462195 | 5971.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





