Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ymia family putative membrane protein | D9K54_27875 | Not Available | Positive | 5430786 - 5430914 | 4866.05 |
| hypothetical protein | D9K54_27880 | Not Available | Positive | 5430917 - 5431084 | 6351.24 |
| hypothetical protein | D9K54_27885 | Not Available | Positive | 5431198 - 5431293 | 3822.77 |
| aconitate hydratase acna | D9K54_27890 | Not Available | Positive | 5431457 - 5434132 | 97717.8 |
| gtp cyclohydrolase ii | D9K54_27895 | Not Available | Negative | 5434196 - 5434786 | 21837.3 |
| phosphatidylglycerophosphatase b | D9K54_27900 | Not Available | Positive | 5434956 - 5435720 | 29052.8 |
| lapa family protein | D9K54_27905 | Not Available | Positive | 5435869 - 5436177 | 11411.2 |
| lps assembly protein b | D9K54_27910 | Not Available | Positive | 5436184 - 5437353 | 44533.6 |
| orotidine-5'-phosphate decarboxylase | D9K54_27915 | Not Available | Positive | 5437546 - 5438283 | 26265.7 |
| stress response translation initiation inhibitor ycih | D9K54_27920 | Not Available | Positive | 5438283 - 5438609 | 11411.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





