Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trp operon leader peptide | D9K54_27820 | Not Available | Negative | 5418666 - 5418710 | 1737.21 |
| 5'-3' exoribonuclease | D9K54_27825 | Not Available | Positive | 5418848 - 5419729 | 32604.7 |
| threonylcarbamoyl-amp synthase | D9K54_27830 | Not Available | Positive | 5419726 - 5420346 | 23199.1 |
| 23s rrna pseudouridylate synthase b | D9K54_27840 | Not Available | Positive | 5422481 - 5423353 | 32599.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | D9K54_27845 | Not Available | Negative | 5423393 - 5423983 | 22014.2 |
| ycik family oxidoreductase | D9K54_27850 | Not Available | Negative | 5423980 - 5424738 | 27977.7 |
| protease sohb | D9K54_27855 | Not Available | Positive | 5424958 - 5426007 | 39396.8 |
| duf2498 family protein | D9K54_27860 | Not Available | Negative | 5426043 - 5426294 | 9386.17 |
| dna topoisomerase i | D9K54_27865 | Not Available | Positive | 5426674 - 5429271 | 97342.0 |
| lysr family transcriptional regulator cysb | D9K54_27870 | Not Available | Positive | 5429481 - 5430455 | 36152.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





