Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0259 family protein | D9K54_27765 | Not Available | Negative | 5408548 - 5409291 | 26420.6 |
| outer membrane protein w | D9K54_27775 | Not Available | Positive | 5409648 - 5410286 | 22929.1 |
| ferritin-like domain-containing protein | D9K54_27780 | Not Available | Negative | 5410346 - 5410852 | 18970.5 |
| ycie/ycif family protein | D9K54_27785 | Not Available | Negative | 5410898 - 5411398 | 18598.2 |
| hypothetical protein | D9K54_27790 | Not Available | Negative | 5411484 - 5411663 | 6059.74 |
| tryptophan synthase subunit alpha | D9K54_27795 | Not Available | Negative | 5412044 - 5412850 | 28707.7 |
| tryptophan synthase subunit beta | D9K54_27800 | Not Available | Negative | 5412850 - 5414043 | 43000.6 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | D9K54_27805 | Not Available | Negative | 5414055 - 5415413 | 49320.0 |
| bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase | D9K54_27810 | Not Available | Negative | 5415417 - 5417012 | 56903.4 |
| anthranilate synthase component i | D9K54_27815 | Not Available | Negative | 5417012 - 5418574 | 57453.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





