Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | D9K54_27510 | Not Available | Negative | 5356274 - 5357365 | 39669.6 |
| aminoacyl-trna hydrolase | D9K54_27515 | Not Available | Negative | 5357482 - 5358066 | 21113.6 |
| duf2583 domain-containing protein | D9K54_27520 | Not Available | Positive | 5358344 - 5358622 | 10486.9 |
| c4-dicarboxylic acid transporter daua | D9K54_27525 | Not Available | Negative | 5358677 - 5360356 | 59466.8 |
| ribose-phosphate pyrophosphokinase | D9K54_27530 | Not Available | Negative | 5360481 - 5361428 | 34220.3 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | D9K54_27535 | Not Available | Negative | 5361579 - 5362430 | 30955.2 |
| lipoprotein localization protein lolb | D9K54_27540 | Not Available | Negative | 5362430 - 5363053 | 23552.1 |
| glutamyl-trna reductase | D9K54_27545 | Not Available | Positive | 5363267 - 5364523 | 46290.4 |
| peptide chain release factor 1 | D9K54_27550 | Not Available | Positive | 5364565 - 5365647 | 40519.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | D9K54_27555 | Not Available | Positive | 5365647 - 5366480 | 31002.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





