Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | D9K54_27455 | Not Available | Negative | 5341229 - 5342041 | 30903.4 |
| abc transporter atp-binding protein | D9K54_27460 | Not Available | Negative | 5342051 - 5342809 | 27403.7 |
| iron abc transporter permease | D9K54_27465 | Not Available | Negative | 5342806 - 5343786 | 34825.2 |
| iron abc transporter substrate-binding protein | D9K54_27470 | Not Available | Negative | 5343786 - 5344808 | 37683.5 |
| alpha,alpha-trehalase | D9K54_27480 | Not Available | Negative | 5345139 - 5346836 | 63711.1 |
| dihydroxyacetone kinase subunit dham | D9K54_27485 | Not Available | Negative | 5347156 - 5348574 | 51492.6 |
| dihydroxyacetone kinase subunit l | D9K54_27490 | Not Available | Negative | 5348585 - 5349217 | 22632.1 |
| dihydroxyacetone kinase subunit dhak | D9K54_27495 | Not Available | Negative | 5349228 - 5350298 | 38200.4 |
| pts-dependent dihydroxyacetone kinase operon transcriptional regulator dhar | D9K54_27500 | Not Available | Positive | 5350526 - 5352445 | 70560.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | D9K54_27505 | Not Available | Negative | 5352545 - 5355430 | 100466.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





