Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1398 domain-containing protein | D9K54_27245 | Not Available | Negative | 5304147 - 5304551 | 15828.0 |
| helix-turn-helix-type transcriptional regulator | D9K54_27250 | Not Available | Negative | 5304772 - 5305503 | 28222.1 |
| diguanylate phosphodiesterase | D9K54_27255 | Not Available | Negative | 5305708 - 5306919 | 45332.5 |
| two-component-system connector protein ycgz | D9K54_27260 | Not Available | Positive | 5307233 - 5307469 | 8720.46 |
| two-component-system connector protein ymga | D9K54_27265 | Not Available | Positive | 5307512 - 5307784 | 10287.5 |
| two-component-system connector protein arir | D9K54_27270 | Not Available | Positive | 5307813 - 5308079 | 9710.59 |
| hypothetical protein | D9K54_27275 | Not Available | Positive | 5308192 - 5308440 | 9701.79 |
| cyclic diguanylate phosphodiesterase | D9K54_27280 | Not Available | Positive | 5308776 - 5310299 | 56828.0 |
| hypothetical protein | D9K54_27285 | Not Available | Positive | 5310431 - 5310649 | 8228.32 |
| autotransporter outer membrane beta-barrel domain-containing protein | D9K54_27290 | Not Available | Positive | 5311049 - 5313712 | 95116.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





