Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase phoq | D9K54_27195 | Not Available | Negative | 5294969 - 5296429 | 55332.9 |
| two-component system response regulator phop | D9K54_27200 | Not Available | Negative | 5296429 - 5297100 | 25536.7 |
| adenylosuccinate lyase | D9K54_27205 | Not Available | Negative | 5297268 - 5298638 | 51556.7 |
| lysogenization regulator hfld | D9K54_27210 | Not Available | Negative | 5298642 - 5299283 | 22949.0 |
| trna 2-thiouridine(34) synthase mnma | D9K54_27215 | Not Available | Negative | 5299319 - 5300425 | 41003.8 |
| nudix hydrolase | D9K54_27220 | Not Available | Negative | 5300479 - 5300940 | 17433.8 |
| 23s rrna pseudouridine synthase e | D9K54_27225 | Not Available | Negative | 5300950 - 5301603 | 24881.8 |
| nadp-dependent isocitrate dehydrogenase | D9K54_27230 | Not Available | Positive | 5301775 - 5303025 | 45772.4 |
| anti-adapter protein iram | D9K54_27235 | Not Available | Negative | 5303128 - 5303451 | 12122.1 |
| hypothetical protein | D9K54_27240 | Not Available | Negative | 5303984 - 5304094 | 4207.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





