Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | D9K54_01655 | Not Available | Negative | 354451 - 355482 | 38358.9 |
| duf1471 domain-containing protein | D9K54_01660 | Not Available | Positive | 355653 - 355913 | 8896.65 |
| catecholate siderophore receptor fiu | D9K54_01665 | Not Available | Positive | 356178 - 358460 | 81927.4 |
| fe2+-dependent dioxygenase | D9K54_01670 | Not Available | Positive | 358502 - 359179 | 25530.2 |
| dksa/trar family c4-type zinc finger protein | D9K54_01675 | Not Available | Positive | 359253 - 359519 | 9804.42 |
| duf1471 domain-containing protein | D9K54_01680 | Not Available | Positive | 359785 - 360045 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | D9K54_01685 | Not Available | Negative | 360274 - 361359 | 38861.3 |
| dna-binding protein ybib | D9K54_01690 | Not Available | Negative | 361500 - 362462 | 35032.6 |
| atp-dependent dna helicase ding | D9K54_01695 | Not Available | Negative | 362490 - 364640 | 81435.8 |
| type iii effector | D9K54_01700 | Not Available | Negative | 364924 - 366936 | 76897.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





