Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body rod protein flgf | D9K54_26945 | Not Available | Positive | 5241623 - 5242378 | 25899.7 |
| flagellar basal body rod protein flgg | D9K54_26950 | Not Available | Positive | 5242550 - 5243332 | 27745.6 |
| flagellar l-ring protein | D9K54_26955 | Not Available | Positive | 5243385 - 5244083 | 24616.9 |
| flagellar p-ring protein | D9K54_26960 | Not Available | Positive | 5244095 - 5245192 | 38171.9 |
| flagellar assembly peptidoglycan hydrolase flgj | D9K54_26965 | Not Available | Positive | 5245192 - 5246133 | 34535.2 |
| flagellar hook-associated protein flgk | D9K54_26970 | Not Available | Positive | 5246199 - 5247842 | 58050.2 |
| flagellar hook-filament junction protein flgl | D9K54_26975 | Not Available | Positive | 5247854 - 5248807 | 34263.9 |
| ribonuclease e | D9K54_26980 | Not Available | Negative | 5249003 - 5252188 | 118207.0 |
| duf2655 domain-containing protein | D9K54_26985 | Not Available | Positive | 5252323 - 5252643 | 12100.6 |
| ribosomal large subunit pseudouridine synthase c | D9K54_26990 | Not Available | Positive | 5252761 - 5253720 | 36014.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





