Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase ulaf | D9K54_26630 | Not Available | Positive | 5195003 - 5195689 | 25279.2 |
| duf1471 domain-containing protein | D9K54_26635 | Not Available | Negative | 5195818 - 5196093 | 10149.9 |
| 30s ribosomal protein s6 | D9K54_26640 | Not Available | Positive | 5196420 - 5196815 | 15187.9 |
| primosomal replication protein n | D9K54_26645 | Not Available | Positive | 5196822 - 5197136 | 11472.9 |
| 30s ribosomal protein s18 | D9K54_26650 | Not Available | Positive | 5197141 - 5197368 | 8986.94 |
| 50s ribosomal protein l9 | D9K54_26655 | Not Available | Positive | 5197410 - 5197859 | 15770.0 |
| duf2686 family protein | D9K54_26660 | Not Available | Negative | 5197930 - 5198724 | 29678.0 |
| transposase | D9K54_26675 | Not Available | Positive | 5199783 - 5200512 | 28215.1 |
| antirestriction protein | D9K54_26680 | Not Available | Positive | 5200796 - 5201281 | 18151.4 |
| dna repair protein radc | D9K54_26685 | Not Available | Positive | 5201297 - 5201773 | 17674.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





