Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imma/irre family metallo-endopeptidase | D9K54_26160 | Not Available | Negative | 5103181 - 5104263 | 41516.1 |
| killer suppression protein higa | D9K54_26165 | Not Available | Negative | 5104260 - 5104586 | 12137.7 |
| hypothetical protein | D9K54_26170 | Not Available | Positive | 5104730 - 5104996 | 9868.6 |
| hypothetical protein | D9K54_26180 | Not Available | Negative | 5105937 - 5106134 | 7146.77 |
| duf4145 domain-containing protein | D9K54_26185 | Not Available | Positive | 5106418 - 5109831 | 131161.0 |
| sam-dependent dna methyltransferase | D9K54_26190 | Not Available | Positive | 5109895 - 5111529 | 61690.8 |
| restriction endonuclease | D9K54_26195 | Not Available | Positive | 5111526 - 5112668 | 43499.9 |
| hypothetical protein | D9K54_26200 | Not Available | Positive | 5112677 - 5114299 | 61770.8 |
| hypothetical protein | D9K54_26205 | Not Available | Positive | 5114299 - 5115195 | 34461.9 |
| porin family protein | D9K54_26215 | Not Available | Positive | 5115817 - 5116563 | 27427.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





