Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 2027958 - 2028033 | Not Available |
| Trna,type:asn,anti_codon:gtt; | Not Available | Not Available | Positive | 2028036 - 2028111 | Not Available |
| Dmt | D9K54_09855 | Not Available | Negative | 2028784 - 2031048 | 83395.0 |
| Recombination-associated protein rdgc | D9K54_09860 | Not Available | Negative | 2031045 - 2031950 | 33612.4 |
| Conserved protein of unknown function uhr | D9K54_09865 | Not Available | Negative | 2031943 - 2032227 | 10783.0 |
| Alanine racemase | D9K54_09870 | Not Available | Positive | 2032502 - 2032681 | 5965.94 |
| Hypothetical protein | D9K54_09875 | Not Available | Positive | 2032690 - 2033478 | 27103.8 |
| Conserved protein of unknown function ppfa | D9K54_09880 | Not Available | Positive | 2033518 - 2033940 | 15745.8 |
| Conserved protein of unknown function upfa | D9K54_09885 | Not Available | Positive | 2034118 - 2034510 | 14777.2 |
| Replication protein repa | D9K54_09890 | Not Available | Positive | 2034846 - 2035730 | 33165.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





