Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygiw/ydei family stress tolerance ob fold protein | D9K54_25905 | Not Available | Negative | 5057672 - 5058064 | 14011.5 |
| two-component system response regulator qseb | D9K54_25910 | Not Available | Positive | 5058216 - 5058875 | 24694.1 |
| two-component sensor histidine kinase | D9K54_25915 | Not Available | Positive | 5058872 - 5060221 | 50275.8 |
| duf2645 family protein | D9K54_25920 | Not Available | Negative | 5060267 - 5060599 | 13253.6 |
| modulator of drug activity b | D9K54_25925 | Not Available | Positive | 5060957 - 5061538 | 21892.1 |
| quinol monooxygenase ygin | D9K54_25930 | Not Available | Positive | 5061569 - 5061883 | 11533.1 |
| dna topoisomerase iv subunit b | D9K54_25935 | Not Available | Negative | 5061931 - 5063823 | 70247.9 |
| esterase yqia | D9K54_25940 | Not Available | Negative | 5063852 - 5064433 | 21642.7 |
| 3',5'-cyclic-amp phosphodiesterase | D9K54_25945 | Not Available | Negative | 5064433 - 5065260 | 30939.7 |
| duf1249 family protein | D9K54_25950 | Not Available | Negative | 5065285 - 5065707 | 16549.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





