Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D9K54_25705 | Not Available | Positive | 5015587 - 5016759 | 41713.0 |
| lps export abc transporter permease lptg | D9K54_25710 | Not Available | Negative | 5016794 - 5017873 | 39779.4 |
| lps export abc transporter permease lptf | D9K54_25715 | Not Available | Negative | 5017870 - 5018940 | 39910.2 |
| ytfj family protein | D9K54_25720 | Not Available | Negative | 5018971 - 5019531 | 20707.1 |
| hypothetical protein | D9K54_25725 | Not Available | Negative | 5019543 - 5020367 | 32031.7 |
| lipopolysaccharide biosynthesis protein | D9K54_25730 | Not Available | Negative | 5020367 - 5021716 | 48740.1 |
| hypothetical protein | D9K54_25735 | Not Available | Negative | 5021762 - 5022520 | 28155.2 |
| thymidylate kinase | D9K54_25740 | Not Available | Negative | 5022552 - 5023265 | 26376.3 |
| thymidylate kinase | D9K54_25745 | Not Available | Positive | 5023439 - 5024131 | 25431.2 |
| low-affinity inorganic phosphate transporter 2 | D9K54_25750 | Not Available | Negative | 5024179 - 5025678 | 53870.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





