Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-methionine-sulfoxide reductase catalytic subunit msrp | D9K54_25330 | Not Available | Negative | 4949500 - 4950504 | 37384.9 |
| hydroxyisourate hydrolase | D9K54_25335 | Not Available | Negative | 4950613 - 4951026 | 15537.6 |
| dna-binding response regulator hprr | D9K54_25340 | Not Available | Positive | 4951159 - 4951830 | 25010.2 |
| hamp domain-containing protein | D9K54_25345 | Not Available | Positive | 4951830 - 4953188 | 50774.6 |
| protein deglycase hcha | D9K54_25350 | Not Available | Negative | 4953296 - 4954147 | 31136.1 |
| hypothetical protein | D9K54_25355 | Not Available | Positive | 4954403 - 4954615 | 8446.73 |
| porin | D9K54_25360 | Not Available | Negative | 4954739 - 4955932 | 42982.9 |
| hypothetical protein | D9K54_25365 | Not Available | Negative | 4956220 - 4956405 | 7328.26 |
| phosphohydrolase | D9K54_25375 | Not Available | Positive | 4956895 - 4957590 | 25996.8 |
| dna cytosine methyltransferase | D9K54_25380 | Not Available | Positive | 4957657 - 4959075 | 53435.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





