Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_24720 | Not Available | Negative | 4845130 - 4846263 | 43284.1 |
| transposase | D9K54_24725 | Not Available | Positive | 4846678 - 4846989 | 11360.6 |
| hypothetical protein | D9K54_24730 | Not Available | Negative | 4847124 - 4847762 | 23506.9 |
| peptidylprolyl isomerase | D9K54_24735 | Not Available | Positive | 4847821 - 4847967 | 5494.88 |
| peptidylprolyl isomerase | D9K54_24740 | Not Available | Positive | 4847981 - 4848601 | 22217.5 |
| d-serine/d-alanine/glycine transporter | D9K54_24745 | Not Available | Positive | 4848910 - 4850322 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | D9K54_24750 | Not Available | Negative | 4850367 - 4851029 | 24898.1 |
| dmt family transporter | D9K54_24755 | Not Available | Negative | 4851137 - 4852102 | 35267.6 |
| sdr family oxidoreductase | D9K54_24760 | Not Available | Negative | 4852210 - 4853070 | 29855.3 |
| transcriptional regulator | D9K54_24765 | Not Available | Positive | 4853159 - 4853539 | 14094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





