Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-sorbose 1-phosphate reductase | D9K54_24420 | Not Available | Negative | 4795839 - 4797116 | 45949.3 |
| pts mannitol cryptic eiicb component | D9K54_24425 | Not Available | Negative | 4797131 - 4798519 | 48974.1 |
| pts mannitol transporter subunit iia | D9K54_24430 | Not Available | Negative | 4798547 - 4798990 | 16046.2 |
| transketolase | D9K54_24435 | Not Available | Negative | 4799304 - 4801295 | 72229.7 |
| metalloprotease | D9K54_24440 | Not Available | Positive | 4801573 - 4802331 | 26844.9 |
| agmatinase | D9K54_24445 | Not Available | Negative | 4802537 - 4803457 | 33558.9 |
| lipoprotein | D9K54_24450 | Not Available | Negative | 4803593 - 4804324 | 26360.7 |
| arginine decarboxylase | D9K54_24455 | Not Available | Negative | 4804470 - 4806446 | 73890.6 |
| virulence promoting factor | D9K54_24460 | Not Available | Negative | 4806455 - 4806586 | 4859.08 |
| hypothetical protein | D9K54_24465 | Not Available | Positive | 4806722 - 4806937 | 8114.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





