Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase | D9K54_24320 | Not Available | Negative | 4775335 - 4775994 | 22861.8 |
| lysr family transcriptional regulator | D9K54_24325 | Not Available | Negative | 4776050 - 4776946 | 32836.9 |
| fmn-dependent nadh-azoreductase | D9K54_24330 | Not Available | Positive | 4777047 - 4777676 | 23000.7 |
| duf1471 domain-containing protein | D9K54_24335 | Not Available | Positive | 4777693 - 4777953 | 9599.34 |
| iron reductase | D9K54_24340 | Not Available | Positive | 4778016 - 4779341 | 49841.9 |
| chromosome initiation inhibitor | D9K54_24345 | Not Available | Positive | 4779412 - 4780305 | 33473.6 |
| methylmalonyl-coa mutase | D9K54_24350 | Not Available | Positive | 4780509 - 4782653 | 77923.7 |
| methylmalonyl co-a mutase-associated gtpase meab | D9K54_24355 | Not Available | Positive | 4782646 - 4783641 | 36692.1 |
| methylmalonyl-coa decarboxylase | D9K54_24360 | Not Available | Positive | 4783652 - 4784437 | 29174.3 |
| acetyl-coa hydrolase/transferase family protein | D9K54_24365 | Not Available | Positive | 4784461 - 4785939 | 53858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





