Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| respiratory nitrate reductase subunit gamma | D9K54_24000 | Not Available | Positive | 4706903 - 4707583 | 26005.5 |
| phzf family isomerase | D9K54_24005 | Not Available | Positive | 4707663 - 4708556 | 32295.7 |
| n-hydroxyarylamine o-acetyltransferase | D9K54_24010 | Not Available | Negative | 4708652 - 4709497 | 32197.4 |
| flavin reductase family protein | D9K54_24015 | Not Available | Positive | 4709670 - 4710239 | 20918.1 |
| tautomerase ppta | D9K54_24020 | Not Available | Negative | 4710243 - 4710470 | 8504.22 |
| hypothetical protein | D9K54_24025 | Not Available | Negative | 4711065 - 4711478 | 15632.0 |
| rhs repeat protein | D9K54_24030 | Not Available | Negative | 4711479 - 4714118 | 100741.0 |
| is6 family transposase | D9K54_24040 | Not Available | Positive | 4714847 - 4714925 | 2852.44 |
| Trna-gly | Not Available | Not Available | Positive | 4716282 - 4716355 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | D9K54_24055 | Not Available | Negative | 4716434 - 4717189 | 26568.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





