Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D9K54_23850 | Not Available | Positive | 4666062 - 4668434 | 89177.3 |
| insulinase family protein | D9K54_23855 | Not Available | Positive | 4668479 - 4671274 | 104725.0 |
| glutamate decarboxylase | D9K54_23860 | Not Available | Positive | 4671636 - 4672501 | 32451.9 |
| glutamate decarboxylase | D9K54_23865 | Not Available | Positive | 4672502 - 4673030 | 19793.6 |
| glutamate:gamma-aminobutyrate antiporter | D9K54_23870 | Not Available | Positive | 4673186 - 4674721 | 55076.0 |
| glycoside hydrolase family 10 protein | D9K54_23875 | Not Available | Positive | 4674852 - 4676171 | 49576.9 |
| diguanylate cyclase | D9K54_23880 | Not Available | Positive | 4676543 - 4677925 | 53180.7 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | D9K54_23885 | Not Available | Positive | 4677950 - 4680349 | 90243.5 |
| d-alanyl-d-alanine dipeptidase | D9K54_23890 | Not Available | Positive | 4680607 - 4681188 | 21228.2 |
| abc transporter substrate-binding protein | D9K54_23895 | Not Available | Positive | 4681202 - 4682752 | 57628.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





